Fix k-mer orientation in streaming getRefPos (non-canonical seed mis-… #336
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| name: C/C++ CI | |
| on: [push] | |
| jobs: | |
| build: | |
| name: ${{ matrix.config.name }} | |
| runs-on: ${{ matrix.config.os }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| config: | |
| - { | |
| name : "ubuntu-latest", | |
| os : ubuntu-latest, | |
| build_type: "Release", cc: "gcc", cxx: "g++" | |
| } | |
| - { | |
| name : "macOS Latest Clang", | |
| os : macos-latest, | |
| build_type: "Release", cc: "clang", cxx: "clang++" | |
| } | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - name: configure | |
| run: mkdir build && cd build && cmake -DCMAKE_C_COMPILER=${{ matrix.config.cc }} -DCMAKE_CXX_COMPILER=${{ matrix.config.cxx }} -DCMAKE_BUILD_TYPE=${{ matrix.config.build_type }} .. | |
| - name: build | |
| run: cmake --build build | |
| - name: test | |
| run: cd build && ./src/pufferfish help |