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LASV dataset

Key Value
name Lassa L Segment Tree
authors Nextstrain
reference NC_004297
workflow https://github.com/nextstrain/lassa/tree/main/nextclade
path nextstrain/lassa

Scope of this dataset

This Nextclade dataset places query sequences on a L scaffold tree for Lassa lineage assignments.

Features

This dataset supports:

  • Assignment of lineages
  • Phylogenetic placement
  • Sequence quality control (QC)

What are Nextclade datasets

Read more about Nextclade datasets in the Nextclade documentation: https://docs.nextstrain.org/projects/nextclade/en/stable/user/datasets.html