Skip to content

feat(minimizer): per-dataset cutoff exponent#463

Draft
ivan-aksamentov wants to merge 2 commits into
feat/multireffrom
feat/minimizer-cutoff
Draft

feat(minimizer): per-dataset cutoff exponent#463
ivan-aksamentov wants to merge 2 commits into
feat/multireffrom
feat/minimizer-cutoff

Conversation

@ivan-aksamentov

Copy link
Copy Markdown
Member

Data-side changes for per-dataset minimizer cutoff.

See nextstrain/nextclade#1772 for the full description, design rationale, and CLI verification results.

ivan-aksamentov and others added 2 commits July 7, 2026 09:20
- Add cutoff_from_exponent() to resolve pathogen.json minimizerIndex.cutoff
- Plumb per-dataset cutoffs through rebuild and minimizer scripts
- Global params.cutoff set to max of all per-dataset cutoffs
@ivan-aksamentov ivan-aksamentov marked this pull request as draft July 7, 2026 09:00
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Labels

None yet

Projects

None yet

Development

Successfully merging this pull request may close these issues.

2 participants